PKGBUILDs/community/gap/PKGBUILD

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# Maintainer: Antonio Rojas <arojas@archlinux.org>
# Contributor: TDY <tdy@archlinux.info>
# Contributor: Rémy Oudompheng <oudomphe@clipper.ens.fr>
# ALARM: Kevin Mihelich <kevin@archlinuxarm.org>
# - rm -fr "$pkgdir"/usr/lib/gap/pkg/digraphs-*/bin/lib/ for aarch64
pkgbase=gap
pkgname=(gap gap-doc gap-packages)
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pkgver=4.11.1
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pkgrel=10
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pkgdesc='Groups, Algorithms, Programming: a system for computational discrete algebra'
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arch=(x86_64)
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url='https://www.gap-system.org/'
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license=(GPL)
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_semigroupsver=4.0.1
_normalizinterfacever=1.3.2
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source=(https://github.com/gap-system/gap/releases/download/v$pkgver/$pkgbase-$pkgver.tar.gz
gap.sh
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https://github.com/semigroups/Semigroups/archive/v$_semigroupsver/Semigroups-$_semigroupsver.tar.gz
https://github.com/gap-packages/NormalizInterface/releases/download/v$_normalizinterfacever/NormalizInterface-$_normalizinterfacever.tar.gz)
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sha256sums=('6635c5da7d82755f8339486b9cac33766f58712f297e8234fba40818902ea304'
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'143fb8a79a52c007903cce13407850df309ef803a9b00398d05169355917de46'
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'09f3f59506e6b273d44954eff91b9af7ffb91263d70e43faf676bcdb51878974'
'05f8ec10bd9975cc3f84249057b96e4865c284d9aaf5d94ac0c3e96377c3645e')
makedepends=(libxaw givaro mpfi cddlib boost libsemigroups c-xsc zeromq fplll wget chrpath fmt eigen normaliz)
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prepare() {
cd gap-$pkgver
# Use system libsemigroups
sed -e 's|test "$with_external_libsemigroups" = yes|true|' -i pkg/semigroups-*/configure
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# Use system normaliz
sed -e 's|.\/build-normaliz.sh|true|' -i bin/BuildPackages.sh
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# Fix https://bugs.archlinux.org/task/55174
sed -e '/xgap/d' -i pkg/sonata-*/PackageInfo.g
sed -e '/XGAP/d' -i pkg/cryst/PackageInfo.g
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# Update semigroups to support libsemigroups 2
rm -r pkg/semigroups-*
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mv ../Semigroups-$_semigroupsver pkg/semigroups-$_semigroupsver
cd pkg/semigroups-$_semigroupsver
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rm prerequisites.sh
mkdir libsemigroups
./autogen.sh
sed -e 's|test "$with_external_libsemigroups" = yes|true|' -i configure
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# Update normalizinterface to support normaliz 3.9
cd ..
rm -r NormalizInterface*
mv ../../NormalizInterface-$_normalizinterfacever .
sed -e 's|\$PWD/NormalizInstallDir|/usr|' -i NormalizInterface-$_normalizinterfacever/configure
cd CddInterface-*
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sed -e 's|/usr/include/cdd|/usr/include/cddlib|' -i configure.ac # Fix build with cddlib 0.94k
rm configure
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}
build() {
cd gap-$pkgver
./configure --prefix=/usr --with-gmp=system
# https://bugzilla.gnome.org/show_bug.cgi?id=655517
sed -i -e 's/ -shared / -Wl,-O1,--as-needed\0/g' libtool
make
make libgap.la
# Install libgap so we can link packages against it
mkdir -p tmp-install
libtool --mode=install install libgap.la "$srcdir"/gap-$pkgver/tmp-install
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rm "$srcdir"/gap-$pkgver/tmp-install/libgap.la
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cd pkg
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export CFLAGS+=" -fcommon" # Fix anupq and cohomolo build with GCC 10
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export CXXFLAGS+=" -I/usr/include/cxsc" # Find c-xsc headers
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export CXXFLAGS+=" -I/usr/include/eigen3" # Fix build of semigroups
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export LDFLAGS+=" -L$srcdir/gap-$pkgver/tmp-install -lgap" # See https://trac.sagemath.org/ticket/27372
export LD_LIBRARY_PATH="$srcdir"/gap-$pkgver/tmp-install
../bin/BuildPackages.sh
}
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_standardpkgs=(GAPDoc-* primgrp-* SmallGrp-* transgrp atlasrep autpgrp-* alnuth-* crisp-* ctbllib-* FactInt-* fga irredsol-* laguna-*
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polenta-* polycyclic-* resclasses-* sophus-* tomlib-*)
package_gap() {
depends=(gmp zlib)
optdepends=('gap-packages: extra packages' 'gap-doc: documentation')
conflicts=(libgap)
replaces=(gap-data libgap gap-4.8 gap-4.8-data)
cd gap-$pkgver
install -Dm644 src/*.h -t "$pkgdir"/usr/include/gap
install -Dm644 gen/config.h -t "$pkgdir"/usr/include/gap
install -Dm644 src/hpc/*.h -t "$pkgdir"/usr/include/gap/hpc
install -d "$pkgdir"/usr/lib
libtool --mode=install install libgap.la "$pkgdir"/usr/lib
mkdir -p "$pkgdir"/usr/{bin,lib/gap/pkg}
cp -r grp lib "$pkgdir"/usr/lib/gap
for _pkg in ${_standardpkgs[@]}; do
cp -r pkg/$_pkg "$pkgdir"/usr/lib/gap/pkg
done
install -Dm755 gap -t "$pkgdir"/usr/lib/gap
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sed -e "s|$PWD|/usr/lib/gap|g" -e "s|-I/usr/lib|-I/usr/include|g" -i sysinfo.gap
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cp -ar sysinfo.gap* "$pkgdir"/usr/lib/gap
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# Install launcher script
install -Dm755 "$srcdir"/gap.sh "$pkgdir"/usr/bin/gap
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mkdir -p "$pkgdir"/usr/share
ln -s /usr/lib/gap -t "$pkgdir"/usr/share # expected by sagemath
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# Add provides for bundled packages
for _f in $(ls "$pkgdir"/usr/lib/gap/pkg); do
_pkg=$(basename $_f | cut -d- -f1 | tr '[:upper:]' '[:lower:]')
_prov=gap-$_pkg
if [[ $_f == *-* ]]; then
_prov+="=$(basename $_f | cut -d- -f2)"
fi
provides+=($_prov)
done
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}
package_gap-doc() {
depends=(gap)
replaces=(gap-4.8-doc)
pkgdesc="Documentation for GAP"
cd gap-$pkgver
mkdir -p "$pkgdir"/usr/lib/gap
cp -r doc "$pkgdir"/usr/lib/gap
}
package_gap-packages() {
depends=(gap)
replaces=(gap-4.8-packages)
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optdepends=('libxaw: xgap package' 'c-xsc: float package' 'mpfi: float package'
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'libmpc: float package' 'fplll: float package' 'zeromq: ZeroMQ interface package' 'planarity: digraph package'
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'curl: curl interface package' 'libsemigroups: semigroups package' 'cddlib: CddLib interface package'
'normaliz: NormalizInterface package')
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pkgdesc="Extra packages for GAP"
cd gap-$pkgver
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mkdir -p "$pkgdir"/usr/{bin,lib/gap}
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cp -r pkg "$pkgdir"/usr/lib/gap
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# fix xgap launch script
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sed -e "s|/build/gap/src/gap-$pkgver|/usr/lib/gap|g" -e 's|^GAP=.*|GAP=/usr/lib/gap/gap|g' \
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"$pkgdir"/usr/lib/gap/pkg/xgap-*/xgap.sh > "$pkgdir"/usr/bin/xgap
chmod 755 "$pkgdir"/usr/bin/xgap
rm "$pkgdir"/usr/lib/gap/pkg/xgap-*/xgap.sh*
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# provided by main gap package
for _pkg in ${_standardpkgs[@]}; do
rm -r "$pkgdir"/usr/lib/gap/pkg/$_pkg
done
# fix RPATH
find "$pkgdir"/usr/lib/gap/pkg/ -name '*.so' | xargs chrpath -d
# remove bundled planarity
rm -fr "$pkgdir"/usr/lib/gap/pkg/digraphs-*/bin/lib/
# remove leftover binaries and source files
find "$pkgdir"/usr/lib/gap/pkg -name .libs -o -name '*.o' | xargs rm -fr
find "$pkgdir"/usr/lib/gap/pkg -type d -name src | xargs rm -fr
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rm -r "$pkgdir"/usr/lib/gap/pkg/digraphs*/extern
rm -r "$pkgdir"/usr/lib/gap/pkg/semigroups*/libsemigroups
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rm -r "$pkgdir"/usr/lib/gap/pkg/CaratInterface/carat*
rm -r "$pkgdir"/usr/lib/gap/pkg/kbmag-1.5.9/standalone
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rm -r "$pkgdir"/usr/lib/gap/pkg/log
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# Add provides for bundled packages
for _f in $(ls "$pkgdir"/usr/lib/gap/pkg); do
_pkg=$(basename $_f | cut -d- -f1 | tr '[:upper:]' '[:lower:]')
_prov=gap-$_pkg
if [[ $_f == *-* ]]; then
_prov+="=$(basename $_f | cut -d- -f2)"
fi
provides+=($_prov)
done
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}