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Update make_msa.sh

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Alex Morehead 2024-03-10 14:47:31 -05:00 committed by GitHub
parent 05d0754285
commit 713d6f1a90
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1 changed files with 6 additions and 3 deletions
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make_msa.sh
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@ -8,9 +8,12 @@ out_dir="$2"
CPU="$3" CPU="$3"
MEM="$4" MEM="$4"
# pipe_dir # template database
PIPE_DIR="$5" DB_TEMPL="$5"
DB_TEMPL="$6"
# current script directory (i.e., pipe directory)
SCRIPT=`realpath -s $0`
export PIPE_DIR=`dirname $SCRIPT`
# sequence databases # sequence databases
DB_UR30="$PIPE_DIR/uniclust/UniRef30_2021_06" DB_UR30="$PIPE_DIR/uniclust/UniRef30_2021_06"