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Revert protein_complex_sm config references in README.md

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Alex Morehead 2024-03-11 18:58:37 -05:00 committed by GitHub
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@ -145,7 +145,7 @@ python -m rf2aa.run_inference --config-name nucleic_acid
<a id="p-sm-complex"></a> <a id="p-sm-complex"></a>
### Predicting Protein Small Molecule Complexes ### Predicting Protein Small Molecule Complexes
To predict protein small molecule complexes, the syntax to input the protein remains the same. Adding in the small molecule works similarly to other inputs. To predict protein small molecule complexes, the syntax to input the protein remains the same. Adding in the small molecule works similarly to other inputs.
Here is an example (from `rf2aa/config/inference/protein_complex_sm.yaml`): Here is an example (from `rf2aa/config/inference/protein_sm.yaml`):
``` ```
defaults: defaults:
- base - base
@ -166,7 +166,7 @@ Small molecule inputs are provided as sdf files or smiles strings and users are
To predict the example: To predict the example:
``` ```
python -m rf2aa.run_inference --config-name protein_complex_sm python -m rf2aa.run_inference --config-name protein_sm
``` ```
<a id="higher-order"></a> <a id="higher-order"></a>
### Predicting Higher Order Complexes ### Predicting Higher Order Complexes