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11 commits

Author SHA1 Message Date
clami66
a7afaf0b83 fix rna alphabet to avoid one-hot feature crash 2024-06-12 14:31:13 +02:00
Nuri Jung
bd57e10676
fix(data): match input format in multimer prediction 
Return as dictionary.

Closes baker-laboratory/RoseTTAFold-All-Atom#11 (supersedes).
Fixes baker-laboratory/RoseTTAFold-All-Atom#12.
 2024-03-18 16:31:48 +09:00
Nuri Jung
156e25ee49
fix(data): join unique a3m results only 
Fixes seoklab/RoseTTAFold-All-Atom#3.
 2024-03-18 16:23:27 +09:00
Rohith Krishna
5b5827bbd6
Merge pull request #13 from amorehead/mamba 
Switch to `mamba` for dependency management, and document other required installation details
 2024-03-11 17:04:19 -07:00
Alex Morehead
1fcd8ec1a9
Revert integer indexing in merge_inputs.py 2024-03-11 19:01:21 -05:00
Rohith Krishna
9e28db02b1 added back sm complex example 2024-03-11 15:05:22 -07:00
Alex Morehead
fb78132452
Fix merge_inputs.py 2024-03-11 10:52:06 -05:00
Alex Morehead
936ce17c8b
Update base.yaml 2024-03-10 15:36:17 -05:00
Rohith Krishna
bd290cca68 remove pickle files 2024-03-05 16:47:38 -08:00
Rohith Krishna
097ad85d4e add in protein multimer inference 2024-03-05 16:45:27 -08:00
Rohith Krishna
f87f5b8cdf initial commit 2024-03-04 22:38:17 -08:00