valid_remapped lig_test dataset.pkl run_digs.sh *.pdb .vscode slurm_logs/ */output/ */notebooks/ */models/ __pycache__/ */run_scripts/ unit_tests/ ruff.toml */scratch/ csblast-2.2.3/ outputs/ pdb100_2021Mar03/ RFAA_paper_weights.pt SE3nv-20240131.sif