VictoriaMetrics/lib/storage/table.go
Dmytro Kozlov 5c92022cc6
lib/storage: fix collect downsampling metrics (#489)
* lib/storage: fix downsampling

* lib/storage: update logic

* lib/storage: fix comments, removed unneeded check
2023-03-19 23:34:46 -07:00

580 lines
15 KiB
Go

package storage
import (
"fmt"
"os"
"path/filepath"
"strings"
"sync"
"sync/atomic"
"time"
"github.com/VictoriaMetrics/VictoriaMetrics/lib/fasttime"
"github.com/VictoriaMetrics/VictoriaMetrics/lib/fs"
"github.com/VictoriaMetrics/VictoriaMetrics/lib/logger"
)
// table represents a single table with time series data.
type table struct {
path string
smallPartitionsPath string
bigPartitionsPath string
s *Storage
ptws []*partitionWrapper
ptwsLock sync.Mutex
flockF *os.File
stop chan struct{}
retentionWatcherWG sync.WaitGroup
finalDedupWatcherWG sync.WaitGroup
}
// partitionWrapper provides refcounting mechanism for the partition.
type partitionWrapper struct {
// Atomic counters must be at the top of struct for proper 8-byte alignment on 32-bit archs.
// See https://github.com/VictoriaMetrics/VictoriaMetrics/issues/212
refCount uint64
// The partition must be dropped if mustDrop > 0
mustDrop uint64
pt *partition
}
func (ptw *partitionWrapper) incRef() {
atomic.AddUint64(&ptw.refCount, 1)
}
func (ptw *partitionWrapper) decRef() {
n := atomic.AddUint64(&ptw.refCount, ^uint64(0))
if int64(n) < 0 {
logger.Panicf("BUG: pts.refCount must be positive; got %d", int64(n))
}
if n > 0 {
return
}
// refCount is zero. Close the partition.
ptw.pt.MustClose()
if atomic.LoadUint64(&ptw.mustDrop) == 0 {
ptw.pt = nil
return
}
// ptw.mustDrop > 0. Drop the partition.
ptw.pt.Drop()
ptw.pt = nil
}
func (ptw *partitionWrapper) scheduleToDrop() {
atomic.AddUint64(&ptw.mustDrop, 1)
}
// openTable opens a table on the given path.
//
// The table is created if it doesn't exist.
func openTable(path string, s *Storage) (*table, error) {
path = filepath.Clean(path)
// Create a directory for the table if it doesn't exist yet.
if err := fs.MkdirAllIfNotExist(path); err != nil {
return nil, fmt.Errorf("cannot create directory for table %q: %w", path, err)
}
// Protect from concurrent opens.
flockF, err := fs.CreateFlockFile(path)
if err != nil {
return nil, fmt.Errorf("cannot create lock file in %q; "+
"make sure the dir isn't used by other processes or manually delete the file if you recover from abrupt VictoriaMetrics crash; error: %w", path, err)
}
// Create directories for small and big partitions if they don't exist yet.
smallPartitionsPath := path + "/small"
if err := fs.MkdirAllIfNotExist(smallPartitionsPath); err != nil {
return nil, fmt.Errorf("cannot create directory for small partitions %q: %w", smallPartitionsPath, err)
}
fs.MustRemoveTemporaryDirs(smallPartitionsPath)
smallSnapshotsPath := smallPartitionsPath + "/snapshots"
if err := fs.MkdirAllIfNotExist(smallSnapshotsPath); err != nil {
return nil, fmt.Errorf("cannot create %q: %w", smallSnapshotsPath, err)
}
fs.MustRemoveTemporaryDirs(smallSnapshotsPath)
bigPartitionsPath := path + "/big"
if err := fs.MkdirAllIfNotExist(bigPartitionsPath); err != nil {
return nil, fmt.Errorf("cannot create directory for big partitions %q: %w", bigPartitionsPath, err)
}
fs.MustRemoveTemporaryDirs(bigPartitionsPath)
bigSnapshotsPath := bigPartitionsPath + "/snapshots"
if err := fs.MkdirAllIfNotExist(bigSnapshotsPath); err != nil {
return nil, fmt.Errorf("cannot create %q: %w", bigSnapshotsPath, err)
}
fs.MustRemoveTemporaryDirs(bigSnapshotsPath)
// Open partitions.
pts, err := openPartitions(smallPartitionsPath, bigPartitionsPath, s)
if err != nil {
return nil, fmt.Errorf("cannot open partitions in the table %q: %w", path, err)
}
tb := &table{
path: path,
smallPartitionsPath: smallPartitionsPath,
bigPartitionsPath: bigPartitionsPath,
s: s,
flockF: flockF,
stop: make(chan struct{}),
}
for _, pt := range pts {
tb.addPartitionNolock(pt)
}
tb.startRetentionWatcher()
tb.startFinalDedupWatcher()
return tb, nil
}
// CreateSnapshot creates tb snapshot and returns paths to small and big parts of it.
// If deadline is reached before snapshot is created error is returned.
// If any error occurs during snapshot created data is not removed.
func (tb *table) CreateSnapshot(snapshotName string, deadline uint64) (string, string, error) {
logger.Infof("creating table snapshot of %q...", tb.path)
startTime := time.Now()
ptws := tb.GetPartitions(nil)
defer tb.PutPartitions(ptws)
dstSmallDir := fmt.Sprintf("%s/small/snapshots/%s", tb.path, snapshotName)
if err := fs.MkdirAllFailIfExist(dstSmallDir); err != nil {
return "", "", fmt.Errorf("cannot create dir %q: %w", dstSmallDir, err)
}
dstBigDir := fmt.Sprintf("%s/big/snapshots/%s", tb.path, snapshotName)
if err := fs.MkdirAllFailIfExist(dstBigDir); err != nil {
fs.MustRemoveAll(dstSmallDir)
return "", "", fmt.Errorf("cannot create dir %q: %w", dstBigDir, err)
}
for _, ptw := range ptws {
if deadline > 0 && fasttime.UnixTimestamp() > deadline {
fs.MustRemoveAll(dstSmallDir)
fs.MustRemoveAll(dstBigDir)
return "", "", fmt.Errorf("cannot create snapshot for %q: timeout exceeded", tb.path)
}
smallPath := dstSmallDir + "/" + ptw.pt.name
bigPath := dstBigDir + "/" + ptw.pt.name
if err := ptw.pt.CreateSnapshotAt(smallPath, bigPath); err != nil {
fs.MustRemoveAll(dstSmallDir)
fs.MustRemoveAll(dstBigDir)
return "", "", fmt.Errorf("cannot create snapshot for partition %q in %q: %w", ptw.pt.name, tb.path, err)
}
}
fs.MustSyncPath(dstSmallDir)
fs.MustSyncPath(dstBigDir)
fs.MustSyncPath(filepath.Dir(dstSmallDir))
fs.MustSyncPath(filepath.Dir(dstBigDir))
logger.Infof("created table snapshot for %q at (%q, %q) in %.3f seconds", tb.path, dstSmallDir, dstBigDir, time.Since(startTime).Seconds())
return dstSmallDir, dstBigDir, nil
}
// MustDeleteSnapshot deletes snapshot with the given snapshotName.
func (tb *table) MustDeleteSnapshot(snapshotName string) {
smallDir := fmt.Sprintf("%s/small/snapshots/%s", tb.path, snapshotName)
fs.MustRemoveDirAtomic(smallDir)
bigDir := fmt.Sprintf("%s/big/snapshots/%s", tb.path, snapshotName)
fs.MustRemoveDirAtomic(bigDir)
}
func (tb *table) addPartitionNolock(pt *partition) {
ptw := &partitionWrapper{
pt: pt,
refCount: 1,
}
tb.ptws = append(tb.ptws, ptw)
}
// MustClose closes the table.
// It is expected that all the pending searches on the table are finished before calling MustClose.
func (tb *table) MustClose() {
close(tb.stop)
tb.retentionWatcherWG.Wait()
tb.finalDedupWatcherWG.Wait()
tb.ptwsLock.Lock()
ptws := tb.ptws
tb.ptws = nil
tb.ptwsLock.Unlock()
for _, ptw := range ptws {
if n := atomic.LoadUint64(&ptw.refCount); n != 1 {
logger.Panicf("BUG: unexpected refCount=%d when closing the partition; probably there are pending searches", n)
}
ptw.decRef()
}
// Release exclusive lock on the table.
if err := tb.flockF.Close(); err != nil {
logger.Panicf("FATAL: cannot release lock on %q: %s", tb.flockF.Name(), err)
}
}
// flushPendingRows flushes all the pending raw rows, so they become visible to search.
//
// This function is for debug purposes only.
func (tb *table) flushPendingRows() {
ptws := tb.GetPartitions(nil)
defer tb.PutPartitions(ptws)
var rows []rawRow
for _, ptw := range ptws {
rows = ptw.pt.flushPendingRows(rows[:0], true)
}
}
// TableMetrics contains essential metrics for the table.
type TableMetrics struct {
partitionMetrics
PartitionsRefCount uint64
}
// UpdateMetrics updates m with metrics from tb.
func (tb *table) UpdateMetrics(m *TableMetrics) {
tb.ptwsLock.Lock()
for _, ptw := range tb.ptws {
ptw.pt.UpdateMetrics(&m.partitionMetrics)
m.PartitionsRefCount += atomic.LoadUint64(&ptw.refCount)
}
tb.ptwsLock.Unlock()
}
// ForceMergePartitions force-merges partitions in tb with names starting from the given partitionNamePrefix.
//
// Partitions are merged sequentially in order to reduce load on the system.
func (tb *table) ForceMergePartitions(partitionNamePrefix string) error {
ptws := tb.GetPartitions(nil)
defer tb.PutPartitions(ptws)
for _, ptw := range ptws {
if !strings.HasPrefix(ptw.pt.name, partitionNamePrefix) {
continue
}
logger.Infof("starting forced merge for partition %q", ptw.pt.name)
startTime := time.Now()
if err := ptw.pt.ForceMergeAllParts(); err != nil {
return fmt.Errorf("cannot complete forced merge for partition %q: %w", ptw.pt.name, err)
}
logger.Infof("forced merge for partition %q has been finished in %.3f seconds", ptw.pt.name, time.Since(startTime).Seconds())
}
return nil
}
// AddRows adds the given rows to the table tb.
func (tb *table) AddRows(rows []rawRow) error {
if len(rows) == 0 {
return nil
}
// Verify whether all the rows may be added to a single partition.
ptwsX := getPartitionWrappers()
defer putPartitionWrappers(ptwsX)
ptwsX.a = tb.GetPartitions(ptwsX.a[:0])
ptws := ptwsX.a
for i, ptw := range ptws {
singlePt := true
for j := range rows {
if !ptw.pt.HasTimestamp(rows[j].Timestamp) {
singlePt = false
break
}
}
if !singlePt {
continue
}
if i != 0 {
// Move the partition with the matching rows to the front of tb.ptws,
// so it will be detected faster next time.
tb.ptwsLock.Lock()
for j := range tb.ptws {
if ptw == tb.ptws[j] {
tb.ptws[0], tb.ptws[j] = tb.ptws[j], tb.ptws[0]
break
}
}
tb.ptwsLock.Unlock()
}
// Fast path - add all the rows into the ptw.
ptw.pt.AddRows(rows)
tb.PutPartitions(ptws)
return nil
}
// Slower path - split rows into per-partition buckets.
ptBuckets := make(map[*partitionWrapper][]rawRow)
var missingRows []rawRow
for i := range rows {
r := &rows[i]
ptFound := false
for _, ptw := range ptws {
if ptw.pt.HasTimestamp(r.Timestamp) {
ptBuckets[ptw] = append(ptBuckets[ptw], *r)
ptFound = true
break
}
}
if !ptFound {
missingRows = append(missingRows, *r)
}
}
for ptw, ptRows := range ptBuckets {
ptw.pt.AddRows(ptRows)
}
tb.PutPartitions(ptws)
if len(missingRows) == 0 {
return nil
}
// The slowest path - there are rows that don't fit any existing partition.
// Create new partitions for these rows.
// Do this under tb.ptwsLock.
minTimestamp, maxTimestamp := tb.getMinMaxTimestamps()
tb.ptwsLock.Lock()
for i := range missingRows {
r := &missingRows[i]
if r.Timestamp < minTimestamp || r.Timestamp > maxTimestamp {
// Silently skip row outside retention, since it should be deleted anyway.
continue
}
// Make sure the partition for the r hasn't been added by another goroutines.
ptFound := false
for _, ptw := range tb.ptws {
if ptw.pt.HasTimestamp(r.Timestamp) {
ptFound = true
ptw.pt.AddRows(missingRows[i : i+1])
break
}
}
if ptFound {
continue
}
pt, err := createPartition(r.Timestamp, tb.smallPartitionsPath, tb.bigPartitionsPath, tb.s)
if err != nil {
// Return only the first error, since it has no sense in returning all errors.
tb.ptwsLock.Unlock()
return fmt.Errorf("errors while adding rows to table %q: %w", tb.path, err)
}
pt.AddRows(missingRows[i : i+1])
tb.addPartitionNolock(pt)
}
tb.ptwsLock.Unlock()
return nil
}
func (tb *table) getMinMaxTimestamps() (int64, int64) {
now := int64(fasttime.UnixTimestamp() * 1000)
minTimestamp := now - tb.s.retentionMsecs
maxTimestamp := now + 2*24*3600*1000 // allow max +2 days from now due to timezones shit :)
if minTimestamp < 0 {
// Negative timestamps aren't supported by the storage.
minTimestamp = 0
}
if maxTimestamp < 0 {
maxTimestamp = (1 << 63) - 1
}
return minTimestamp, maxTimestamp
}
func (tb *table) startRetentionWatcher() {
tb.retentionWatcherWG.Add(1)
go func() {
tb.retentionWatcher()
tb.retentionWatcherWG.Done()
}()
}
func (tb *table) retentionWatcher() {
ticker := time.NewTicker(time.Minute)
defer ticker.Stop()
for {
select {
case <-tb.stop:
return
case <-ticker.C:
}
minTimestamp := int64(fasttime.UnixTimestamp()*1000) - tb.s.retentionMsecs
var ptwsDrop []*partitionWrapper
tb.ptwsLock.Lock()
dst := tb.ptws[:0]
for _, ptw := range tb.ptws {
if ptw.pt.tr.MaxTimestamp < minTimestamp {
ptwsDrop = append(ptwsDrop, ptw)
} else {
dst = append(dst, ptw)
}
}
tb.ptws = dst
tb.ptwsLock.Unlock()
if len(ptwsDrop) == 0 {
continue
}
// There are partitions to drop. Drop them.
// Remove table references from partitions, so they will be eventually
// closed and dropped after all the pending searches are done.
for _, ptw := range ptwsDrop {
ptw.scheduleToDrop()
ptw.decRef()
}
}
}
func (tb *table) startFinalDedupWatcher() {
tb.finalDedupWatcherWG.Add(1)
go func() {
tb.finalDedupWatcher()
tb.finalDedupWatcherWG.Done()
}()
}
func (tb *table) finalDedupWatcher() {
if !isDedupEnabled() {
// Deduplication is disabled.
return
}
f := func() {
ptws := tb.GetPartitions(nil)
defer tb.PutPartitions(ptws)
timestamp := timestampFromTime(time.Now())
currentPartitionName := timestampToPartitionName(timestamp)
for _, ptw := range ptws {
if ptw.pt.name == currentPartitionName || !ptw.pt.isFinalDedupNeeded() {
// Do not run final dedup for the current month.
continue
}
if err := ptw.pt.runFinalDedup(); err != nil {
logger.Errorf("cannot run final dedup for partition %s: %s", ptw.pt.name, err)
continue
}
}
}
t := time.NewTicker(time.Hour)
defer t.Stop()
for {
select {
case <-tb.stop:
return
case <-t.C:
f()
}
}
}
// GetPartitions appends tb's partitions snapshot to dst and returns the result.
//
// The returned partitions must be passed to PutPartitions
// when they no longer needed.
func (tb *table) GetPartitions(dst []*partitionWrapper) []*partitionWrapper {
tb.ptwsLock.Lock()
for _, ptw := range tb.ptws {
ptw.incRef()
dst = append(dst, ptw)
}
tb.ptwsLock.Unlock()
return dst
}
// PutPartitions deregisters ptws obtained via GetPartitions.
func (tb *table) PutPartitions(ptws []*partitionWrapper) {
for _, ptw := range ptws {
ptw.decRef()
}
}
func openPartitions(smallPartitionsPath, bigPartitionsPath string, s *Storage) ([]*partition, error) {
// Certain partition directories in either `big` or `small` dir may be missing
// after restoring from backup. So populate partition names from both dirs.
ptNames := make(map[string]bool)
if err := populatePartitionNames(smallPartitionsPath, ptNames); err != nil {
return nil, err
}
if err := populatePartitionNames(bigPartitionsPath, ptNames); err != nil {
return nil, err
}
var pts []*partition
for ptName := range ptNames {
smallPartsPath := smallPartitionsPath + "/" + ptName
bigPartsPath := bigPartitionsPath + "/" + ptName
pt, err := openPartition(smallPartsPath, bigPartsPath, s)
if err != nil {
mustClosePartitions(pts)
return nil, fmt.Errorf("cannot open partition %q: %w", ptName, err)
}
pts = append(pts, pt)
}
return pts, nil
}
func populatePartitionNames(partitionsPath string, ptNames map[string]bool) error {
des, err := os.ReadDir(partitionsPath)
if err != nil {
return fmt.Errorf("cannot read directory with partitions: %w", err)
}
for _, de := range des {
if !fs.IsDirOrSymlink(de) {
// Skip non-directories
continue
}
ptName := de.Name()
if ptName == "snapshots" {
// Skip directory with snapshots
continue
}
ptNames[ptName] = true
}
return nil
}
func mustClosePartitions(pts []*partition) {
for _, pt := range pts {
pt.MustClose()
}
}
type partitionWrappers struct {
a []*partitionWrapper
}
func getPartitionWrappers() *partitionWrappers {
v := ptwsPool.Get()
if v == nil {
return &partitionWrappers{}
}
return v.(*partitionWrappers)
}
func putPartitionWrappers(ptwsX *partitionWrappers) {
ptwsX.a = ptwsX.a[:0]
ptwsPool.Put(ptwsX)
}
var ptwsPool sync.Pool