VictoriaMetrics/lib/logstorage/block_stream_reader.go
Aliaksandr Valialkin 3346576a3a
lib/logstorage: refactor storage format to be more efficient for querying wide events
It has been appeared that VictoriaLogs is frequently used for collecting logs with tens of fields.
For example, standard Kuberntes setup on top of Filebeat generates more than 20 fields per each log.
Such logs are also known as "wide events".

The previous storage format was optimized for logs with a few fields. When at least a single field
was referenced in the query, then the all the meta-information about all the log fields was unpacked
and parsed per each scanned block during the query. This could require a lot of additional disk IO
and CPU time when logs contain many fields. Resolve this issue by providing an (field -> metainfo_offset)
index per each field in every data block. This index allows reading and extracting only the needed
metainfo for fields used in the query. This index is stored in columnsHeaderIndexFilename ( columns_header_index.bin ).
This allows increasing performance for queries over wide events by 10x and more.

Another issue was that the data for bloom filters and field values across all the log fields except of _msg
was intermixed in two files - fieldBloomFilename ( field_bloom.bin ) and fieldValuesFilename ( field_values.bin ).
This could result in huge disk read IO overhead when some small field was referred in the query,
since the Operating System usually reads more data than requested. It reads the data from disk
in at least 4KiB blocks (usually the block size is much bigger in the range 64KiB - 512KiB).
So, if 512-byte bloom filter or values' block is read from the file, then the Operating System
reads up to 512KiB of data from disk, which results in 1000x disk read IO overhead. This overhead isn't visible
for recently accessed data, since this data is usually stored in RAM (aka Operating System page cache),
but this overhead may become very annoying when performing the query over large volumes of data
which isn't present in OS page cache.

The solution for this issue is to split bloom filters and field values across multiple shards.
This reduces the worst-case disk read IO overhead by at least Nx where N is the number of shards,
while the disk read IO overhead is completely removed in best case when the number of columns doesn't exceed N.
Currently the number of shards is 8 - see bloomValuesShardsCount . This solution increases
performance for queries over large volumes of newly ingested data by up to 1000x.

The new storage format is versioned as v1, while the old storage format is version as v0.
It is stored in the partHeader.FormatVersion.

Parts with the old storage format are converted into parts with the new storage format during background merge.
It is possible to force merge by querying /internal/force_merge HTTP endpoint - see https://docs.victoriametrics.com/victorialogs/#forced-merge .
2024-10-17 11:09:16 -03:00

507 lines
16 KiB
Go

package logstorage
import (
"path/filepath"
"sync"
"github.com/cespare/xxhash/v2"
"github.com/VictoriaMetrics/VictoriaMetrics/lib/bytesutil"
"github.com/VictoriaMetrics/VictoriaMetrics/lib/filestream"
"github.com/VictoriaMetrics/VictoriaMetrics/lib/fs"
"github.com/VictoriaMetrics/VictoriaMetrics/lib/logger"
)
type readerWithStats struct {
r filestream.ReadCloser
bytesRead uint64
}
func (r *readerWithStats) reset() {
r.r = nil
r.bytesRead = 0
}
func (r *readerWithStats) init(rc filestream.ReadCloser) {
r.reset()
r.r = rc
}
// Path returns the path to r file
func (r *readerWithStats) Path() string {
return r.r.Path()
}
// MustReadFull reads len(data) to r.
func (r *readerWithStats) MustReadFull(data []byte) {
fs.MustReadData(r.r, data)
r.bytesRead += uint64(len(data))
}
func (r *readerWithStats) Read(p []byte) (int, error) {
n, err := r.r.Read(p)
r.bytesRead += uint64(n)
return n, err
}
func (r *readerWithStats) MustClose() {
if r.r != nil {
r.r.MustClose()
r.r = nil
}
}
// streamReaders contains readers for blockStreamReader
type streamReaders struct {
columnNamesReader readerWithStats
metaindexReader readerWithStats
indexReader readerWithStats
columnsHeaderIndexReader readerWithStats
columnsHeaderReader readerWithStats
timestampsReader readerWithStats
messageBloomValuesReader bloomValuesReader
oldBloomValuesReader bloomValuesReader
bloomValuesShards [bloomValuesShardsCount]bloomValuesReader
}
type bloomValuesReader struct {
bloom readerWithStats
values readerWithStats
}
func (r *bloomValuesReader) reset() {
r.bloom.reset()
r.values.reset()
}
func (r *bloomValuesReader) init(sr bloomValuesStreamReader) {
r.bloom.init(sr.bloom)
r.values.init(sr.values)
}
func (r *bloomValuesReader) totalBytesRead() uint64 {
return r.bloom.bytesRead + r.values.bytesRead
}
func (r *bloomValuesReader) MustClose() {
r.bloom.MustClose()
r.values.MustClose()
}
type bloomValuesStreamReader struct {
bloom filestream.ReadCloser
values filestream.ReadCloser
}
func (sr *streamReaders) reset() {
sr.columnNamesReader.reset()
sr.metaindexReader.reset()
sr.indexReader.reset()
sr.columnsHeaderIndexReader.reset()
sr.columnsHeaderReader.reset()
sr.timestampsReader.reset()
sr.messageBloomValuesReader.reset()
sr.oldBloomValuesReader.reset()
for i := range sr.bloomValuesShards[:] {
sr.bloomValuesShards[i].reset()
}
}
func (sr *streamReaders) init(columnNamesReader, metaindexReader, indexReader, columnsHeaderIndexReader, columnsHeaderReader, timestampsReader filestream.ReadCloser,
messageBloomValuesReader, oldBloomValuesReader bloomValuesStreamReader, bloomValuesShards [bloomValuesShardsCount]bloomValuesStreamReader,
) {
sr.columnNamesReader.init(columnNamesReader)
sr.metaindexReader.init(metaindexReader)
sr.indexReader.init(indexReader)
sr.columnsHeaderIndexReader.init(columnsHeaderIndexReader)
sr.columnsHeaderReader.init(columnsHeaderReader)
sr.timestampsReader.init(timestampsReader)
sr.messageBloomValuesReader.init(messageBloomValuesReader)
sr.oldBloomValuesReader.init(oldBloomValuesReader)
for i := range sr.bloomValuesShards[:] {
sr.bloomValuesShards[i].init(bloomValuesShards[i])
}
}
func (sr *streamReaders) totalBytesRead() uint64 {
n := uint64(0)
n += sr.columnNamesReader.bytesRead
n += sr.metaindexReader.bytesRead
n += sr.indexReader.bytesRead
n += sr.columnsHeaderIndexReader.bytesRead
n += sr.columnsHeaderReader.bytesRead
n += sr.timestampsReader.bytesRead
n += sr.messageBloomValuesReader.totalBytesRead()
n += sr.oldBloomValuesReader.totalBytesRead()
for i := range sr.bloomValuesShards[:] {
n += sr.bloomValuesShards[i].totalBytesRead()
}
return n
}
func (sr *streamReaders) MustClose() {
sr.columnNamesReader.MustClose()
sr.metaindexReader.MustClose()
sr.indexReader.MustClose()
sr.columnsHeaderIndexReader.MustClose()
sr.columnsHeaderReader.MustClose()
sr.timestampsReader.MustClose()
sr.messageBloomValuesReader.MustClose()
sr.oldBloomValuesReader.MustClose()
for i := range sr.bloomValuesShards[:] {
sr.bloomValuesShards[i].MustClose()
}
}
func (sr *streamReaders) getBloomValuesReaderForColumnName(name string, partFormatVersion uint) *bloomValuesReader {
if name == "" {
return &sr.messageBloomValuesReader
}
if partFormatVersion < 1 {
return &sr.oldBloomValuesReader
}
h := xxhash.Sum64(bytesutil.ToUnsafeBytes(name))
idx := h % uint64(len(sr.bloomValuesShards))
return &sr.bloomValuesShards[idx]
}
// blockStreamReader is used for reading blocks in streaming manner from a part.
type blockStreamReader struct {
// blockData contains the data for the last read block
blockData blockData
// a contains data for blockData
a arena
// ph is the header for the part
ph partHeader
// streamReaders contains data readers in stream mode
streamReaders streamReaders
// columnNameIDs contains columnName->id mapping for all the column names seen in the part
columnNameIDs map[string]uint64
// columnNames constains id->columnName mapping for all the columns seen in the part
columnNames []string
// indexBlockHeaders contains the list of all the indexBlockHeader entries for the part
indexBlockHeaders []indexBlockHeader
// blockHeaders contains the list of blockHeader entries for the current indexBlockHeader pointed by nextIndexBlockIdx
blockHeaders []blockHeader
// nextIndexBlockIdx is the index of the next item to read from indexBlockHeaders
nextIndexBlockIdx int
// nextBlockIdx is the index of the next item to read from blockHeaders
nextBlockIdx int
// globalUncompressedSizeBytes is the total size of log entries seen in the part
globalUncompressedSizeBytes uint64
// globalRowsCount is the number of log entries seen in the part
globalRowsCount uint64
// globalBlocksCount is the number of blocks seen in the part
globalBlocksCount uint64
// sidLast is the stream id for the previously read block
sidLast streamID
// minTimestampLast is the minimum timestamp for the previously read block
minTimestampLast int64
}
// reset resets bsr, so it can be re-used
func (bsr *blockStreamReader) reset() {
bsr.blockData.reset()
bsr.a.reset()
bsr.ph.reset()
bsr.streamReaders.reset()
bsr.columnNameIDs = nil
bsr.columnNames = nil
ihs := bsr.indexBlockHeaders
if len(ihs) > 10e3 {
// The ihs len is unbound, so it is better to drop too long indexBlockHeaders in order to reduce memory usage
ihs = nil
}
for i := range ihs {
ihs[i].reset()
}
bsr.indexBlockHeaders = ihs[:0]
bhs := bsr.blockHeaders
for i := range bhs {
bhs[i].reset()
}
bsr.blockHeaders = bhs[:0]
bsr.nextIndexBlockIdx = 0
bsr.nextBlockIdx = 0
bsr.globalUncompressedSizeBytes = 0
bsr.globalRowsCount = 0
bsr.globalBlocksCount = 0
bsr.sidLast.reset()
bsr.minTimestampLast = 0
}
// Path returns part path for bsr (e.g. file path, url or in-memory reference)
func (bsr *blockStreamReader) Path() string {
path := bsr.streamReaders.metaindexReader.Path()
return filepath.Dir(path)
}
// MustInitFromInmemoryPart initializes bsr from mp.
func (bsr *blockStreamReader) MustInitFromInmemoryPart(mp *inmemoryPart) {
bsr.reset()
bsr.ph = mp.ph
// Initialize streamReaders
columnNamesReader := mp.columnNames.NewReader()
metaindexReader := mp.metaindex.NewReader()
indexReader := mp.index.NewReader()
columnsHeaderIndexReader := mp.columnsHeaderIndex.NewReader()
columnsHeaderReader := mp.columnsHeader.NewReader()
timestampsReader := mp.timestamps.NewReader()
messageBloomValuesReader := mp.messageBloomValues.NewStreamReader()
var oldBloomValuesReader bloomValuesStreamReader
var bloomValuesShards [bloomValuesShardsCount]bloomValuesStreamReader
for i := range bloomValuesShards[:] {
bloomValuesShards[i] = mp.bloomValuesShards[i].NewStreamReader()
}
bsr.streamReaders.init(columnNamesReader, metaindexReader, indexReader, columnsHeaderIndexReader, columnsHeaderReader, timestampsReader,
messageBloomValuesReader, oldBloomValuesReader, bloomValuesShards)
// Read columnNames data
bsr.columnNames, bsr.columnNameIDs = mustReadColumnNames(&bsr.streamReaders.columnNamesReader)
// Read metaindex data
bsr.indexBlockHeaders = mustReadIndexBlockHeaders(bsr.indexBlockHeaders[:0], &bsr.streamReaders.metaindexReader)
}
// MustInitFromFilePart initializes bsr from file part at the given path.
func (bsr *blockStreamReader) MustInitFromFilePart(path string) {
bsr.reset()
// Files in the part are always read without OS cache pollution,
// since they are usually deleted after the merge.
const nocache = true
bsr.ph.mustReadMetadata(path)
columnNamesPath := filepath.Join(path, columnNamesFilename)
metaindexPath := filepath.Join(path, metaindexFilename)
indexPath := filepath.Join(path, indexFilename)
columnsHeaderIndexPath := filepath.Join(path, columnsHeaderIndexFilename)
columnsHeaderPath := filepath.Join(path, columnsHeaderFilename)
timestampsPath := filepath.Join(path, timestampsFilename)
// Open data readers
var columnNamesReader filestream.ReadCloser
if bsr.ph.FormatVersion >= 1 {
columnNamesReader = filestream.MustOpen(columnNamesPath, nocache)
}
metaindexReader := filestream.MustOpen(metaindexPath, nocache)
indexReader := filestream.MustOpen(indexPath, nocache)
var columnsHeaderIndexReader filestream.ReadCloser
if bsr.ph.FormatVersion >= 1 {
columnsHeaderIndexReader = filestream.MustOpen(columnsHeaderIndexPath, nocache)
}
columnsHeaderReader := filestream.MustOpen(columnsHeaderPath, nocache)
timestampsReader := filestream.MustOpen(timestampsPath, nocache)
messageBloomFilterPath := filepath.Join(path, messageBloomFilename)
messageValuesPath := filepath.Join(path, messageValuesFilename)
messageBloomValuesReader := bloomValuesStreamReader{
bloom: filestream.MustOpen(messageBloomFilterPath, nocache),
values: filestream.MustOpen(messageValuesPath, nocache),
}
var oldBloomValuesReader bloomValuesStreamReader
var bloomValuesShards [bloomValuesShardsCount]bloomValuesStreamReader
if bsr.ph.FormatVersion < 1 {
bloomPath := filepath.Join(path, oldBloomFilename)
oldBloomValuesReader.bloom = filestream.MustOpen(bloomPath, nocache)
valuesPath := filepath.Join(path, oldValuesFilename)
oldBloomValuesReader.values = filestream.MustOpen(valuesPath, nocache)
} else {
for i := range bloomValuesShards[:] {
shard := &bloomValuesShards[i]
bloomPath := getBloomFilePath(path, uint64(i))
shard.bloom = filestream.MustOpen(bloomPath, nocache)
valuesPath := getValuesFilePath(path, uint64(i))
shard.values = filestream.MustOpen(valuesPath, nocache)
}
}
// Initialize streamReaders
bsr.streamReaders.init(columnNamesReader, metaindexReader, indexReader, columnsHeaderIndexReader, columnsHeaderReader, timestampsReader,
messageBloomValuesReader, oldBloomValuesReader, bloomValuesShards)
if bsr.ph.FormatVersion >= 1 {
// Read columnNames data
bsr.columnNames, bsr.columnNameIDs = mustReadColumnNames(&bsr.streamReaders.columnNamesReader)
}
// Read metaindex data
bsr.indexBlockHeaders = mustReadIndexBlockHeaders(bsr.indexBlockHeaders[:0], &bsr.streamReaders.metaindexReader)
}
// NextBlock reads the next block from bsr and puts it into bsr.blockData.
//
// false is returned if there are no other blocks.
//
// bsr.blockData is valid until the next call to NextBlock().
func (bsr *blockStreamReader) NextBlock() bool {
for bsr.nextBlockIdx >= len(bsr.blockHeaders) {
if !bsr.nextIndexBlock() {
return false
}
}
ih := &bsr.indexBlockHeaders[bsr.nextIndexBlockIdx-1]
bh := &bsr.blockHeaders[bsr.nextBlockIdx]
th := &bh.timestampsHeader
// Validate bh
if bh.streamID.less(&bsr.sidLast) {
logger.Panicf("FATAL: %s: blockHeader.streamID=%s cannot be smaller than the streamID from the previously read block: %s", bsr.Path(), &bh.streamID, &bsr.sidLast)
}
if bh.streamID.equal(&bsr.sidLast) && th.minTimestamp < bsr.minTimestampLast {
logger.Panicf("FATAL: %s: timestamps.minTimestamp=%d cannot be smaller than the minTimestamp for the previously read block for the same streamID: %d",
bsr.Path(), th.minTimestamp, bsr.minTimestampLast)
}
bsr.minTimestampLast = th.minTimestamp
bsr.sidLast = bh.streamID
if th.minTimestamp < ih.minTimestamp {
logger.Panicf("FATAL: %s: timestampsHeader.minTimestamp=%d cannot be smaller than indexBlockHeader.minTimestamp=%d", bsr.Path(), th.minTimestamp, ih.minTimestamp)
}
if th.maxTimestamp > ih.maxTimestamp {
logger.Panicf("FATAL: %s: timestampsHeader.maxTimestamp=%d cannot be bigger than indexBlockHeader.maxTimestamp=%d", bsr.Path(), th.maxTimestamp, ih.minTimestamp)
}
// Read bsr.blockData
bsr.a.reset()
bsr.blockData.mustReadFrom(&bsr.a, bh, &bsr.streamReaders, bsr.ph.FormatVersion, bsr.columnNames)
bsr.globalUncompressedSizeBytes += bh.uncompressedSizeBytes
bsr.globalRowsCount += bh.rowsCount
bsr.globalBlocksCount++
if bsr.globalUncompressedSizeBytes > bsr.ph.UncompressedSizeBytes {
logger.Panicf("FATAL: %s: too big size of entries read: %d; mustn't exceed partHeader.UncompressedSizeBytes=%d",
bsr.Path(), bsr.globalUncompressedSizeBytes, bsr.ph.UncompressedSizeBytes)
}
if bsr.globalRowsCount > bsr.ph.RowsCount {
logger.Panicf("FATAL: %s: too many log entries read so far: %d; mustn't exceed partHeader.RowsCount=%d", bsr.Path(), bsr.globalRowsCount, bsr.ph.RowsCount)
}
if bsr.globalBlocksCount > bsr.ph.BlocksCount {
logger.Panicf("FATAL: %s: too many blocks read so far: %d; mustn't exceed partHeader.BlocksCount=%d", bsr.Path(), bsr.globalBlocksCount, bsr.ph.BlocksCount)
}
// The block has been sucessfully read
bsr.nextBlockIdx++
return true
}
func (bsr *blockStreamReader) nextIndexBlock() bool {
// Advance to the next indexBlockHeader
if bsr.nextIndexBlockIdx >= len(bsr.indexBlockHeaders) {
// No more blocks left
// Validate bsr.ph
totalBytesRead := bsr.streamReaders.totalBytesRead()
if bsr.ph.CompressedSizeBytes != totalBytesRead {
logger.Panicf("FATAL: %s: partHeader.CompressedSizeBytes=%d must match the size of data read: %d", bsr.Path(), bsr.ph.CompressedSizeBytes, totalBytesRead)
}
if bsr.ph.UncompressedSizeBytes != bsr.globalUncompressedSizeBytes {
logger.Panicf("FATAL: %s: partHeader.UncompressedSizeBytes=%d must match the size of entries read: %d",
bsr.Path(), bsr.ph.UncompressedSizeBytes, bsr.globalUncompressedSizeBytes)
}
if bsr.ph.RowsCount != bsr.globalRowsCount {
logger.Panicf("FATAL: %s: partHeader.RowsCount=%d must match the number of log entries read: %d", bsr.Path(), bsr.ph.RowsCount, bsr.globalRowsCount)
}
if bsr.ph.BlocksCount != bsr.globalBlocksCount {
logger.Panicf("FATAL: %s: partHeader.BlocksCount=%d must match the number of blocks read: %d", bsr.Path(), bsr.ph.BlocksCount, bsr.globalBlocksCount)
}
return false
}
ih := &bsr.indexBlockHeaders[bsr.nextIndexBlockIdx]
// Validate ih
metaindexReader := &bsr.streamReaders.metaindexReader
if ih.minTimestamp < bsr.ph.MinTimestamp {
logger.Panicf("FATAL: %s: indexBlockHeader.minTimestamp=%d cannot be smaller than partHeader.MinTimestamp=%d",
metaindexReader.Path(), ih.minTimestamp, bsr.ph.MinTimestamp)
}
if ih.maxTimestamp > bsr.ph.MaxTimestamp {
logger.Panicf("FATAL: %s: indexBlockHeader.maxTimestamp=%d cannot be bigger than partHeader.MaxTimestamp=%d",
metaindexReader.Path(), ih.maxTimestamp, bsr.ph.MaxTimestamp)
}
// Read indexBlock for the given ih
bb := longTermBufPool.Get()
bb.B = ih.mustReadNextIndexBlock(bb.B[:0], &bsr.streamReaders)
bsr.blockHeaders = resetBlockHeaders(bsr.blockHeaders)
var err error
bsr.blockHeaders, err = unmarshalBlockHeaders(bsr.blockHeaders[:0], bb.B, bsr.ph.FormatVersion)
longTermBufPool.Put(bb)
if err != nil {
logger.Panicf("FATAL: %s: cannot unmarshal blockHeader entries: %s", bsr.streamReaders.indexReader.Path(), err)
}
bsr.nextIndexBlockIdx++
bsr.nextBlockIdx = 0
return true
}
// MustClose closes bsr.
func (bsr *blockStreamReader) MustClose() {
bsr.streamReaders.MustClose()
bsr.reset()
}
// getBlockStreamReader returns blockStreamReader.
//
// The returned blockStreamReader must be initialized with MustInit().
// call putBlockStreamReader() when the retruend blockStreamReader is no longer needed.
func getBlockStreamReader() *blockStreamReader {
v := blockStreamReaderPool.Get()
if v == nil {
v = &blockStreamReader{}
}
bsr := v.(*blockStreamReader)
return bsr
}
// putBlockStreamReader returns bsr to the pool.
//
// bsr cannot be used after returning to the pool.
func putBlockStreamReader(bsr *blockStreamReader) {
bsr.reset()
blockStreamReaderPool.Put(bsr)
}
var blockStreamReaderPool sync.Pool
// mustCloseBlockStreamReaders calls MustClose() on the given bsrs.
func mustCloseBlockStreamReaders(bsrs []*blockStreamReader) {
for _, bsr := range bsrs {
bsr.MustClose()
}
}