Rohith Krishna
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bf214835d6
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Merge pull request #100 from ToyokoLabs/bugfix33
Fixing error ERROR: could not open file '.../RoseTTAFold-All-Atom/uniclust/UniRef30_2021_06_cs219.ffdata'
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2024-04-30 08:27:30 -07:00 |
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Rohith Krishna
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d268a4d5f2
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Merge pull request #97 from AlexanderMath/patch-1
Add link to RFAA paper for convenience.
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2024-04-30 08:25:52 -07:00 |
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Sebastian Bassi
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86b6c4e881
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Fixing issue #33
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2024-04-29 10:09:33 -07:00 |
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AlexanderMath
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d46e8dbd00
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Update README.md
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2024-04-28 12:20:51 +01:00 |
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Rohith Krishna
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b461e12016
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Merge pull request #49 from seoklab/backport
Fix some bugs in data handling code
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2024-03-23 16:29:26 -07:00 |
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Nuri Jung
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bd57e10676
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fix(data): match input format in multimer prediction
Return as dictionary.
Closes baker-laboratory/RoseTTAFold-All-Atom#11 (supersedes).
Fixes baker-laboratory/RoseTTAFold-All-Atom#12.
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2024-03-18 16:31:48 +09:00 |
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Nuri Jung
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156e25ee49
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fix(data): join unique a3m results only
Fixes seoklab/RoseTTAFold-All-Atom#3.
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2024-03-18 16:23:27 +09:00 |
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Rohith Krishna
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c09141f1d5
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Merge pull request #29 from baker-laboratory/license
added license
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2024-03-13 10:21:31 -07:00 |
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Rohith Krishna
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e6f9656158
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added license
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2024-03-13 10:20:18 -07:00 |
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Rohith Krishna
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5b5827bbd6
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Merge pull request #13 from amorehead/mamba
Switch to `mamba` for dependency management, and document other required installation details
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2024-03-11 17:04:19 -07:00 |
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Rohith Krishna
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50be55ad7a
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Merge pull request #16 from baker-laboratory/add_sm_example
added back sm complex example
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2024-03-11 17:01:37 -07:00 |
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Alex Morehead
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1fcd8ec1a9
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Revert integer indexing in merge_inputs.py
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2024-03-11 19:01:21 -05:00 |
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Alex Morehead
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ec93ac6346
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Revert protein_complex_sm config references in README.md
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2024-03-11 18:58:37 -05:00 |
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Rohith Krishna
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9e28db02b1
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added back sm complex example
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2024-03-11 15:05:22 -07:00 |
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Alex Morehead
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fb78132452
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Fix merge_inputs.py
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2024-03-11 10:52:06 -05:00 |
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Alex Morehead
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e51736412b
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Update README.md
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2024-03-10 19:08:26 -05:00 |
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Alex Morehead
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b91deacb8d
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Add files via upload
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2024-03-10 16:42:22 -05:00 |
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Alex Morehead
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936ce17c8b
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Update base.yaml
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2024-03-10 15:36:17 -05:00 |
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Alex Morehead
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87ea2888f6
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Update make_msa.sh
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2024-03-10 15:16:59 -05:00 |
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Alex Morehead
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3ec18abac4
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Update environment.yaml
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2024-03-10 14:58:56 -05:00 |
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Alex Morehead
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4700c499a2
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Update .gitignore
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2024-03-10 14:57:56 -05:00 |
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Alex Morehead
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d470ab4df0
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Add instructions for configuring signalp6 to README.md
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2024-03-10 14:56:18 -05:00 |
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Alex Morehead
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713d6f1a90
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Update make_msa.sh
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2024-03-10 14:47:31 -05:00 |
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Alex Morehead
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05d0754285
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Create install_dependencies.sh
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2024-03-10 14:46:21 -05:00 |
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Alex Morehead
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64228a4ac8
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Create make_ss.sh
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2024-03-10 14:45:48 -05:00 |
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Alex Morehead
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54e3142a20
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Call install_dependencies.sh in README.md
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2024-03-10 14:44:09 -05:00 |
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Alex Morehead
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be632e2d9e
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Create environment.yaml
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2024-03-09 20:07:15 -06:00 |
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Alex Morehead
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001226a0af
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Update README.md
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2024-03-09 20:06:20 -06:00 |
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Alex Morehead
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ea81b735aa
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Update README.md
Create an initial update to README.md for Mamba environment
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2024-03-09 19:09:13 -06:00 |
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Rohith Krishna
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6bc5c745a2
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Update README.md
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2024-03-05 17:01:14 -08:00 |
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Rohith Krishna
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d96e013a54
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Merge pull request #1 from baker-laboratory/multimer
Multimer
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2024-03-05 16:54:01 -08:00 |
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Rohith Krishna
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bd290cca68
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remove pickle files
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2024-03-05 16:47:38 -08:00 |
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Rohith Krishna
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097ad85d4e
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add in protein multimer inference
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2024-03-05 16:45:27 -08:00 |
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Rohith Krishna
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f87f5b8cdf
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initial commit
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2024-03-04 22:38:17 -08:00 |
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